Probabilistic Modelling
FA-DPS: A Composite Severity Score for Friedreich Ataxia
Developing a Composite Severity Score for Friedreich’s Ataxia: A Robust Alternative to mFARS for Predictive Modeling
A better target for machine learning: a biologically grounded disease-progression score instead of a subjective clinical rating.
The problem
Sensor models are trained to predict a clinical scale that is subjective, nonlinear and limited in sensitivity, so it makes a weak ground truth.
The approach
FA-DPS models clinical and sensor biomarkers as sigmoidal trajectories along a latent disease timeline, estimating patient-specific progression and shared biomarker dynamics.
The outcome
Models trained on FA-DPS predicted more accurately than models trained on the clinical scale across all three instrumented devices.
In detail
Developed FA-DPS, a composite disease-progression score that models clinical and sensor-derived biomarkers along a latent disease timeline. The framework uses biologically plausible sigmoidal trajectories to capture shared progression dynamics and patient-specific variation. It was designed as a more robust and interpretable target for machine-learning models than relying solely on mFARS.
Built with
- Biomedical AI
- Disease Progression
- Latent Variable Modelling
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By Kanishka Ranaweera, PhD, Machine Learning Engineer in Melbourne, Victoria, Australia. hello@kanishkabuilt.me